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Augustus 3.4.0
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This is the complete list of members for SS::SimilarityScore, including all inherited members.
| alignments (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| alignmentsReadable (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| avgArgMaxProb() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| backtrackingDB(int number_Alignments) (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| fillSimilarityMatrix() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| printAlignment() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| printAlignmentDB() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| printBlockPos() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| printInterBlock() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| printSimilarityMatrix() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| readFiles(const char *seqFileName, const char *profileFileName) (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| score() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| SimilarityMatrix_empty() (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| SimilarityScore(double g, double b, double g_i, double iw1, double iw2, double e_i, double e_n) (defined in SS::SimilarityScore) | SS::SimilarityScore | |
| ~SimilarityScore() (defined in SS::SimilarityScore) | SS::SimilarityScore |
1.9.8