SnippetProbs Class Reference

#include <statemodel.hh>

Public Member Functions
	SnippetProbs (const char *dna, int k, bool forwardStrand=true)
Double	getSeqProb (int base, int len)
void	setEmiProbs (vector< Double > *emiprobs)
void	addProb (int base, int len, Double p)

Protected Attributes
const char *	dna
int	n
vector< Double > *	emiprobs
int	k
SnippetList **	snippetlist
bool	forwardStrand

Detailed Description

Author

Emmanouil Stafilarakis

Mario Stanke

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The documentation for this class was generated from the following files:

• include/statemodel.hh
• src/statemodel.cc