|
Augustus 3.4.0
|
This is the complete list of members for ContentModel, including all inherited members.
| ContentModel() (defined in ContentModel) | ContentModel | inline |
| ContentModel(int k, int f=1) (defined in ContentModel) | ContentModel | inline |
| copyPatProb(int f) const (defined in ContentModel) | ContentModel | inline |
| DiscrimDifference(const ContentModel *a, const ContentModel *b, int n, int fa=0, int fb=0) (defined in ContentModel) | ContentModel | static |
| generateRandSeq(int n, int startFrame=0) const (defined in ContentModel) | ContentModel | |
| getMeanContent() (defined in ContentModel) | ContentModel | |
| getNumFrames() const (defined in ContentModel) | ContentModel | inline |
| getNumPatterns() const (defined in ContentModel) | ContentModel | inline |
| getPatProb(int f, int pn) const (defined in ContentModel) | ContentModel | inline |
| init(int k, int f) (defined in ContentModel) | ContentModel | inline |
| print() (defined in ContentModel) | ContentModel | |
| randomIndex(const Double *p, int count) (defined in ContentModel) | ContentModel | static |
| seqProbUnderModel(const char *seq, int len, int frame) const (defined in ContentModel) | ContentModel | |
| setPatProb(const Matrix< Double > &newpatprob) (defined in ContentModel) | ContentModel | |
| setPatProb(int frame, const vector< Double > &newRow) (defined in ContentModel) | ContentModel | |
| setRandomPatProbs() (defined in ContentModel) | ContentModel |
1.9.8