GBProcessor Class Reference

A GenBank data processor. More...

#include <genbank.hh>

Public Member Functions
	GBProcessor (string filename)
FileType	fileType ()
GBPositions *	nextPosition ()
Gene *	getGene (GBPositions *pos)
AnnoSequence *	getAnnoSequence (GBPositions *pos)
AnnoSequence *	getAnnoSequenceList ()
AnnoSequence *	getSequenceList ()

Detailed Description

A GenBank data processor.

Author

Emmanouil Stafilarakis

See also

GBSplitter

Constructor & Destructor Documentation

GBProcessor()

GBProcessor::GBProcessor

(

string

filename

)

Constructor

Member Function Documentation

getGene()

Gene * GBProcessor::getGene

(

GBPositions *

pos

)

Get the gene information of the current data section. param pos A pointer to a GBPosition object with all needed information to build a gene object. return A gene object. see Gene, GBPositions

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The documentation for this class was generated from the following files:

• include/genbank.hh
• src/genbank.cc