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Augustus 3.4.0
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This is the complete list of members for HintGroup, including all inherited members.
| addCopyNumber(int n) (defined in HintGroup) | HintGroup | inline |
| addFeature(Feature *hint) (defined in HintGroup) | HintGroup | |
| addIncompGroup(HintGroup *otherGroup) (defined in HintGroup) | HintGroup | |
| addStrongerGroup(HintGroup *otherGroup) (defined in HintGroup) | HintGroup | |
| canCauseAltSplice() (defined in HintGroup) | HintGroup | |
| compatibleWith(HintGroup &other, Feature *&rascal1, Feature *&rascal2, bool &weakerThan) (defined in HintGroup) | HintGroup | |
| getBegin() const (defined in HintGroup) | HintGroup | inline |
| getCopyNumber() const (defined in HintGroup) | HintGroup | inline |
| getEnd() const (defined in HintGroup) | HintGroup | inline |
| getGeneBegin() const (defined in HintGroup) | HintGroup | inline |
| getGeneEnd() const (defined in HintGroup) | HintGroup | inline |
| getHints() (defined in HintGroup) | HintGroup | inline |
| getIncompGroups() (defined in HintGroup) | HintGroup | inline |
| getName() const (defined in HintGroup) | HintGroup | inline |
| getPriority() const (defined in HintGroup) | HintGroup | inline |
| getSize() const (defined in HintGroup) | HintGroup | inline |
| getSource() const (defined in HintGroup) | HintGroup | inline |
| getStrongerGroups() (defined in HintGroup) | HintGroup | inline |
| HintGroup() (defined in HintGroup) | HintGroup | inline |
| isTrashy() (defined in HintGroup) | HintGroup | |
| nestedGenePossible(HintGroup &other) (defined in HintGroup) | HintGroup | |
| operator< (defined in HintGroup) | HintGroup | friend |
| operator== (defined in HintGroup) | HintGroup | friend |
| print(ostream &out, bool withHints=false) (defined in HintGroup) | HintGroup | |
| setActiveFlag(bool active) (defined in HintGroup) | HintGroup | |
| setDiscardFlag(bool discard) (defined in HintGroup) | HintGroup | |
| sortFeatures() (defined in HintGroup) | HintGroup | |
| sortIncompGroup() (defined in HintGroup) | HintGroup | inline |
| updateFeatureConformance(HintGroup &other) (defined in HintGroup) | HintGroup | |
| ~HintGroup() (defined in HintGroup) | HintGroup | inline |