Augustus 3.4.0
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HintGroup Member List

This is the complete list of members for HintGroup, including all inherited members.

addCopyNumber(int n) (defined in HintGroup)HintGroupinline
addFeature(Feature *hint) (defined in HintGroup)HintGroup
addIncompGroup(HintGroup *otherGroup) (defined in HintGroup)HintGroup
addStrongerGroup(HintGroup *otherGroup) (defined in HintGroup)HintGroup
canCauseAltSplice() (defined in HintGroup)HintGroup
compatibleWith(HintGroup &other, Feature *&rascal1, Feature *&rascal2, bool &weakerThan) (defined in HintGroup)HintGroup
getBegin() const (defined in HintGroup)HintGroupinline
getCopyNumber() const (defined in HintGroup)HintGroupinline
getEnd() const (defined in HintGroup)HintGroupinline
getGeneBegin() const (defined in HintGroup)HintGroupinline
getGeneEnd() const (defined in HintGroup)HintGroupinline
getHints() (defined in HintGroup)HintGroupinline
getIncompGroups() (defined in HintGroup)HintGroupinline
getName() const (defined in HintGroup)HintGroupinline
getPriority() const (defined in HintGroup)HintGroupinline
getSize() const (defined in HintGroup)HintGroupinline
getSource() const (defined in HintGroup)HintGroupinline
getStrongerGroups() (defined in HintGroup)HintGroupinline
HintGroup() (defined in HintGroup)HintGroupinline
isTrashy() (defined in HintGroup)HintGroup
nestedGenePossible(HintGroup &other) (defined in HintGroup)HintGroup
operator< (defined in HintGroup)HintGroupfriend
operator== (defined in HintGroup)HintGroupfriend
print(ostream &out, bool withHints=false) (defined in HintGroup)HintGroup
setActiveFlag(bool active) (defined in HintGroup)HintGroup
setDiscardFlag(bool discard) (defined in HintGroup)HintGroup
sortFeatures() (defined in HintGroup)HintGroup
sortIncompGroup() (defined in HintGroup)HintGroupinline
updateFeatureConformance(HintGroup &other) (defined in HintGroup)HintGroup
~HintGroup() (defined in HintGroup)HintGroupinline