PP::FsHitType Struct Reference

Public Member Functions
	FsHitType (int p, int b, bool r, PartScoreType sc)
int	start ()
void	linkTo (HitQueue &queue)
void	pushOn (HitQueue &queue)

Public Attributes
int	pos
FsHitType *	head
int	blockNo
bool	reverse
double	score
int	blockfrom
int	blockto
double	pathScore
FsHitType *	predecessor

Static Public Attributes
static int	maxIntronLen = 100000
static double	intronMalus = 1e-5

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The documentation for this struct was generated from the following files:

• include/pp_fastBlockSearcher.hh
• src/pp_fastBlockSearcher.cc