Augustus 3.4.0
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structure representing one cell of a similarity matrix More...
#include <pp_simscore.hh>
Public Attributes | |
double | score |
std::vector< std::tuple< int, int, char > > | prev |
structure representing one cell of a similarity matrix
Contains the highest similarity score of a position in the similarity matrix, the indices of the cell from which the score was computed and the corresponding type of score.
types: m: match without gaps s: gap in the protein sequence p: gap in the protein profile _: match with gap in the protein sequence in the interblock region