Augustus 3.4.0
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Public Member Functions | Public Attributes | List of all members
State Class Reference

Public Member Functions

 State (long first, long last, StateType t)
 
StatecloneStateSequence ()
 
 State (const State &other)
 
int frame ()
 
bool frame_compatible (const Feature *hint)
 
void addEvidence (string srcname)
 
bool operator< (const State &other) const
 
bool operator== (const State &other) const
 
int length ()
 
Strand strand ()
 
StategetBiologicalState ()
 
void setTruncFlag (long end, long predEnd, long dnalen)
 
void includeFrameModIntoType ()
 

Public Attributes

long begin
 
long end
 
Statenext
 
StateType type
 
Double prob
 
bool hasScore
 
float apostprob
 
int sampleCount
 
Evidenceevidence
 
char truncated
 
int framemod
 

Member Data Documentation

◆ begin

long State::begin

The beginning position of the current state.

◆ end

long State::end

The ending position of the current state.

◆ next

State* State::next

The next state.


The documentation for this class was generated from the following files: